STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gidBGlucose-inhibited division protein B. (204 aa)    
Predicted Functional Partners:
gidA
Glucose-inhibited division protein A.
 
  
 0.976
trmE
tRNA modification GTPase TrmE.
 
  
 0.896
AM202_0058
Hypothetical protein.
  
  
 0.709
relA
GTP pyrophosphokinase.
  
 
 0.593
AM202_0059
Hypothetical protein.
  
  
 0.586
era
GTP-binding protein Era; COG1159 GTPase.
  
     0.564
EEV24976.1
COG0036 Pentose-5-phosphate-3-epimerase.
 
 
 0.563
rpsF
COG0360 Ribosomal protein S6.
 
   
 0.548
rimM
16S rRNA-processing protein rimM.
 
   
 0.541
ftsY
Cell division protein FtsY-like protein.
  
 
 
 0.511
Your Current Organism:
Actinobacillus minor
NCBI taxonomy Id: 591023
Other names: A. minor 202, Actinobacillus minor 202, Actinobacillus minor str. 202, Actinobacillus minor strain 202
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.