STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
kpsCCapsule polysaccharide modification protein LipA. (691 aa)    
Predicted Functional Partners:
hcsB
Capsule polysaccharide modification protein HcsB.
   
 0.986
EEV24756.1
Capsule polysaccharide export inner-membrane protein; COG1682 ABC-type polysaccharide/polyol phosphate export systems, permease component.
 
  
 0.940
EEV24755.1
ATP-binding protein; COG1134 ABC-type polysaccharide/polyol phosphate transport system, ATPase component.
 
  
 0.938
EEV24757.1
COG3524 Capsule polysaccharide export protein.
 
  
 0.938
EEV24758.1
COG1596 Periplasmic protein involved in polysaccharide export.
 
  
 0.933
AM202_0011
Putative amino-acid ABC transporter-binding protein.
       0.480
AM202_0014
Hypothetical protein.
       0.471
AM202_0015
Hypothetical protein.
       0.471
merP
MerP; Copper chaperone.
       0.471
kpsF
Arabinose-5-phosphate isomerase.
     
 0.452
Your Current Organism:
Actinobacillus minor
NCBI taxonomy Id: 591023
Other names: A. minor 202, Actinobacillus minor 202, Actinobacillus minor str. 202, Actinobacillus minor strain 202
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.