STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEV24604.1Lipooligosaccharide biosynthesis protein; COG3306 Glycosyltransferase involved in LPS biosynthesis. (263 aa)    
Predicted Functional Partners:
cyaY
COG1965 Protein implicated in iron transport, frataxin homolog.
       0.752
EEV24767.1
COG3306 Glycosyltransferase involved in LPS biosynthesis.
  
     0.750
EEV24606.1
COG0514 Superfamily II DNA helicase.
       0.653
apxIIC
ApxIIC.
  
     0.645
EEV25195.1
Hypothetical protein; COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily.
  
     0.635
AM202_0735
Hypothetical protein.
  
     0.630
AM202_0316
Predicted TonB dependent/ligand-gated channel.
  
     0.629
apxIIA
ApxIIA.
  
     0.595
EEV25312.1
Hypothetical protein; COG0457 FOG: TPR repeat.
  
     0.595
EEV24920.1
Arginine ABC superfamily ATP binding cassette transporter, membrane protein; COG2990 Uncharacterized protein conserved in bacteria.
  
     0.530
Your Current Organism:
Actinobacillus minor
NCBI taxonomy Id: 591023
Other names: A. minor 202, Actinobacillus minor 202, Actinobacillus minor str. 202, Actinobacillus minor strain 202
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.