STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
aspCAspartate aminotransferase. (398 aa)    
Predicted Functional Partners:
EEV25369.1
P-protein; COG1605 Chorismate mutase.
    
 0.827
tyrA
Bifunctional chorismate mutase/prephenate dehydrogenase; COG1605 Chorismate mutase.
    
 0.826
argA
Amino-acid acetyltransferase.
  
  
 0.819
thrA
Bifunctional aspartokinase/homoserine dehydrogenase.
  
 
 0.810
EEV24801.1
COG0039 Malate/lactate dehydrogenases.
   
 0.769
gdhA
Glutamate dehydrogenase.
   
 0.756
putA
Bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase.
  
 
 0.753
fumC
Fumarase hydratase class II.
   
 0.742
EEV24328.1
COG1012 NAD-dependent aldehyde dehydrogenases.
   
 0.725
aroA
3-phosphoshikimate 1-carboxyvinyltransferase.
 
  
 0.721
Your Current Organism:
Actinobacillus minor
NCBI taxonomy Id: 591023
Other names: A. minor 202, Actinobacillus minor 202, Actinobacillus minor str. 202, Actinobacillus minor strain 202
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.