STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEV24656.1COG0796 Glutamate racemase. (253 aa)    
Predicted Functional Partners:
EEV25346.1
COG0127 Xanthosine triphosphate pyrophosphatase.
 
 
  0.914
murD
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase.
 
  
 0.859
murC
COG0773 UDP-N-acetylmuramate-alanine ligase.
  
  
 0.797
murF
UDP-MurNAc-pentapeptide synthetase.
 
  
 0.783
murE
UDP-N-acetylmuramyl-tripeptide synthetase.
 
  
 0.763
guaA
Bifunctional GMP synthase/glutamine amidotransferase protein.
  
  
  0.728
EEV24318.1
COG0046 Phosphoribosylformylglycinamidine (FGAM) synthase, synthetase domain.
    
  0.704
gdhA
Glutamate dehydrogenase.
  
 
 0.608
guaB
Inositol-5-monophosphate dehydrogenase.
    
 0.561
EEV25270.1
UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamayl- medo- diaminopimelate ligase; COG0773 UDP-N-acetylmuramate-alanine ligase.
     
 0.556
Your Current Organism:
Actinobacillus minor
NCBI taxonomy Id: 591023
Other names: A. minor 202, Actinobacillus minor 202, Actinobacillus minor str. 202, Actinobacillus minor strain 202
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