STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEV24672.1COG0458 Carbamoylphosphate synthase large subunit (split gene in MJ). (392 aa)    
Predicted Functional Partners:
EEV24726.1
COG5016 Pyruvate/oxaloacetate carboxyltransferase.
  
 0.989
EEV24859.1
COG5016 Pyruvate/oxaloacetate carboxyltransferase.
  
 0.989
EEV24673.1
COG4947 Uncharacterized protein conserved in bacteria.
 
     0.948
EEV24973.1
COG0511 Biotin carboxyl carrier protein.
  
 0.939
accD
Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta.
  
 0.914
EEV24241.1
COG0825 Acetyl-CoA carboxylase alpha subunit.
  
 0.895
ribD
Riboflavin biosynthesis protein.
   
   0.847
birA
Bifunctional biotin operon repressor/biotin synthetase BirA.
  
 0.810
EEV24289.1
Putative fatty acid oxidation complex alpha subunit; COG1024 Enoyl-CoA hydratase/carnithine racemase.
    
 0.796
EEV25110.1
COG0281 Malic enzyme.
   
 0.787
Your Current Organism:
Actinobacillus minor
NCBI taxonomy Id: 591023
Other names: A. minor 202, Actinobacillus minor 202, Actinobacillus minor str. 202, Actinobacillus minor strain 202
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