STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEV24680.1COG2825 Outer membrane protein. (284 aa)    
Predicted Functional Partners:
lpxD
COG1044 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase.
  
    0.915
EEV24681.1
Protective surface antigen D15 precursor; COG4775 Outer membrane protein/protective antigen OMA87.
  
  
 0.870
EEV24678.1
(3R)-hydroxymyristoyl-ACP dehydratase; COG0764 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratases.
  
    0.757
EEV24677.1
COG1043 Acyl-[acyl carrier protein]--UDP-N-acetylglucosamine O-acyltransferase.
  
  
 0.704
EEV24989.1
Porin opacity type; COG3637 Opacity protein and related surface antigens.
    
 
 0.677
EEV25408.1
COG3637 Opacity protein and related surface antigens.
    
 
 0.677
EEV24682.1
Putative zinc metalloprotease; COG0750 Predicted membrane-associated Zn-dependent proteases 1.
  
    0.662
EEV24581.1
Plp4; COG2913 Small protein A (tmRNA-binding).
  
   0.504
plpD
Lipoprotein Plp4.
  
   0.504
EEV24723.1
COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)proteins.
  
   0.504
Your Current Organism:
Actinobacillus minor
NCBI taxonomy Id: 591023
Other names: A. minor 202, Actinobacillus minor 202, Actinobacillus minor str. 202, Actinobacillus minor strain 202
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