STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AM202_0078Transcriptional repressor NrdR. (149 aa)    
Predicted Functional Partners:
AM202_0077
Hypothetical protein.
       0.768
aroA
3-phosphoshikimate 1-carboxyvinyltransferase.
       0.627
EEV24939.1
Hypothetical protein.
    
   0.585
ribD
Riboflavin biosynthesis protein.
  
  
 0.584
ribBA
Riboflavin biosynthesis protein.
    
 0.565
argA
Amino-acid acetyltransferase.
   
   0.470
EEV24599.1
DNA polymerase I; COG0258 5'-3' exonuclease (including N-terminal domain of PolI).
     
 0.445
EEV25411.1
Nicotinamide-nucleotide adenylyltransferase; COG1396 Predicted transcriptional regulators.
  
  
 0.429
AM202_0079
Putative lipoprotein.
       0.418
Your Current Organism:
Actinobacillus minor
NCBI taxonomy Id: 591023
Other names: A. minor 202, Actinobacillus minor 202, Actinobacillus minor str. 202, Actinobacillus minor strain 202
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.