STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ihfAIntegration host factor, alpha chain. (98 aa)    
Predicted Functional Partners:
ihfB
Integration host factor subunit beta; COG0776 Bacterial nucleoid DNA-binding protein.
 
0.973
pheT
phenylalanyl-tRNA synthetase beta chain.
   
   0.748
hfq
RNA-binding protein Hfq.
   
  
 0.739
EEV24453.1
DNA-binding protein HU; COG0776 Bacterial nucleoid DNA-binding protein.
  
0.691
EEV24975.1
COG0236 Acyl carrier protein.
   
  
 0.686
EEV24457.1
COG3027 Uncharacterized protein conserved in bacteria.
   
    0.648
dnaB
Replicative DNA helicase.
  
 
 0.623
EEV25116.1
COG1551 Carbon storage regulator (could also regulate swarming and quorum sensing).
  
 
 0.620
AM202_0079
Putative lipoprotein.
  
    0.602
dnaG
DNA primase.
    
 0.596
Your Current Organism:
Actinobacillus minor
NCBI taxonomy Id: 591023
Other names: A. minor 202, Actinobacillus minor 202, Actinobacillus minor str. 202, Actinobacillus minor strain 202
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.