STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pheSphenylalanyl-tRNA synthetase alpha chain. (328 aa)    
Predicted Functional Partners:
pheT
phenylalanyl-tRNA synthetase beta chain.
 
 0.999
metG
COG0143 Methionyl-tRNA synthetase.
  
 0.994
EEV25122.1
COG0172 Seryl-tRNA synthetase.
  
 
 0.758
EEV24422.1
COG1185 Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase).
   
  
 0.708
rpoA
DNA-directed RNA polymerase subunit alpha.
 
  
 0.682
rplP
50S ribosomal protein L16.
   
 
 0.680
EEV24685.1
COG0441 Threonyl-tRNA synthetase.
 
 
 0.655
EEV25304.1
COG0049 Ribosomal protein S7.
   
  
 0.647
EEV25305.1
COG0480 Translation elongation factors (GTPases).
  
 
 0.646
rplT
COG0292 Ribosomal protein L20.
 
  
 0.626
Your Current Organism:
Actinobacillus minor
NCBI taxonomy Id: 591023
Other names: A. minor 202, Actinobacillus minor 202, Actinobacillus minor str. 202, Actinobacillus minor strain 202
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.