STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AM202_0085Hypothetical protein. (78 aa)    
Predicted Functional Partners:
dnaB
Replicative DNA helicase.
       0.655
EEV24310.1
COG2915 Uncharacterized protein involved in purine metabolism.
  
    0.582
trmA
tRNA (uracil-5-)-methyltransferase.
  
     0.571
EEV24928.1
Hypothetical protein; COG1399 Predicted metal-binding, possibly nucleic acid-binding protein.
  
     0.533
sixA
Possible phosphohistidine phosphatase.
  
   
 0.527
rnd
Ribonuclease D.
 
     0.525
AM202_0575
Putative DNA uptake protein.
  
     0.515
ndh
NADH dehydrogenase.
  
     0.496
EEV24890.1
COG0594 RNase P protein component.
  
     0.489
EEV25405.1
COG3101 Uncharacterized protein conserved in bacteria.
  
     0.482
Your Current Organism:
Actinobacillus minor
NCBI taxonomy Id: 591023
Other names: A. minor 202, Actinobacillus minor 202, Actinobacillus minor str. 202, Actinobacillus minor strain 202
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.