STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dnaBReplicative DNA helicase. (487 aa)    
Predicted Functional Partners:
dnaG
DNA primase.
 0.984
EEV25040.1
COG2812 DNA polymerase III, gamma/tau subunits.
 
 
 0.928
dnaA
COG0593 ATPase involved in DNA replication initiation.
 
 
 0.920
uvrD
DNA helicase II.
  
 0.872
EEV25249.1
COG2965 Primosomal replication protein N.
   
 0.867
priA
Primosomal protein N'.
   
 0.863
rep
ATP-dependent DNA helicase.
   
 0.854
dnaE
COG0587 DNA polymerase III, alpha subunit.
 
 0.832
holA
COG1466 DNA polymerase III, delta subunit.
   
 0.827
EEV24606.1
COG0514 Superfamily II DNA helicase.
  
 
 0.823
Your Current Organism:
Actinobacillus minor
NCBI taxonomy Id: 591023
Other names: A. minor 202, Actinobacillus minor 202, Actinobacillus minor str. 202, Actinobacillus minor strain 202
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.