STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AM202_0087Hypothetical protein. (333 aa)    
Predicted Functional Partners:
efp
Elongation factor P.
 
   
 0.843
EEV24744.1
lysyl-tRNA synthetase; COG2269 Truncated, possibly inactive, lysyl-tRNA synthetase (class II).
 
  
 0.820
EEV24774.1
COG0274 Deoxyribose-phosphate aldolase.
    
 0.672
AM202_0088
Hypothetical protein.
       0.645
bioB
Biotin synthase.
    
 0.607
dnaB
Replicative DNA helicase.
  
    0.553
EEV25405.1
COG3101 Uncharacterized protein conserved in bacteria.
  
   
 0.514
thrA
Bifunctional aspartokinase/homoserine dehydrogenase.
    
 0.511
AM202_0085
Hypothetical protein.
       0.471
EEV24720.1
COG0624 Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases.
  
 
  0.423
Your Current Organism:
Actinobacillus minor
NCBI taxonomy Id: 591023
Other names: A. minor 202, Actinobacillus minor 202, Actinobacillus minor str. 202, Actinobacillus minor strain 202
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.