STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEV24740.1COG3119 Arylsulfatase A and related enzymes. (482 aa)    
Predicted Functional Partners:
fabG
3-ketoacyl-(acyl-carrier-protein) reductase; COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases).
   
 0.958
EEV24738.1
COG0641 Arylsulfatase regulator (Fe-S oxidoreductase).
 
 
 0.952
lacZ
Beta-galactosidase.
 
 0.817
rpsD
30S ribosomal protein S4.
   
 
  0.771
EEV24533.1
Excinuclease ABC subunit A.
  
   0.701
glgC
Glucose-1-phosphate adenylyltransferase.
   
    0.693
EEV24741.1
Putative symporter YidK; COG4146 Predicted symporter.
 
     0.687
rhlB
ATP-dependent RNA helicase RhlB.
    
 0.673
srmB
ATP-dependent RNA helicase.
    
 0.673
EEV24424.1
Cold-shock DEAD box protein A-like protein; COG0513 Superfamily II DNA and RNA helicases.
    
 0.673
Your Current Organism:
Actinobacillus minor
NCBI taxonomy Id: 591023
Other names: A. minor 202, Actinobacillus minor 202, Actinobacillus minor str. 202, Actinobacillus minor strain 202
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.