STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AM202_0092iron(III) ABC transporter permease protein. (313 aa)    
Predicted Functional Partners:
AM202_0093
iron(III) ABC transporter, ATP-binding protein.
 
 0.997
AM202_0090
ABC transport system periplasmic protein.
 
 
 0.996
AM202_0091
ABC transport system permease protein.
 
0.994
fhuC
Ferrichrome ABC transporter ATP-binding protein.
 
    0.616
EEV24668.1
BtuC protein; COG0609 ABC-type Fe3+-siderophore transport system, permease component.
  
  
0.480
AM202_0186
Hemin transport system permease protein.
  
  
0.477
efp
Elongation factor P.
       0.462
AM202_0094
Hypothetical protein.
       0.459
AM202_0095
Putative phosphate permease.
       0.451
fhuB
Ferrichrome uptake protein FhuB.
  
  
0.433
Your Current Organism:
Actinobacillus minor
NCBI taxonomy Id: 591023
Other names: A. minor 202, Actinobacillus minor 202, Actinobacillus minor str. 202, Actinobacillus minor strain 202
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.