STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEV24787.1COG2183 Transcriptional accessory protein. (778 aa)    
Predicted Functional Partners:
AM202_0310
Tetratricopeptide repeat (TPR) family protein.
    
 0.896
EEV24350.1
Hypothetical protein; COG0457 FOG: TPR repeat.
    
 0.896
AM202_0809
Hypothetical protein.
    
 0.896
hepA
ATP-dependent helicase HepA.
  
 0.876
rpoA
DNA-directed RNA polymerase subunit alpha.
    
 0.871
rpoB
DNA-directed RNA polymerase subunit beta.
   
 0.854
rpoZ
COG1758 DNA-directed RNA polymerase, subunit K/omega.
    
  0.850
EEV24786.1
Putative fimbrial biogenesis and twitching motility protein PilF-like protein; COG3063 Tfp pilus assembly protein PilF.
       0.741
EEV24785.1
Hypothetical protein; COG0820 Predicted Fe-S-cluster redox enzyme.
       0.665
fabG
3-ketoacyl-(acyl-carrier-protein) reductase; COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases).
    
   0.548
Your Current Organism:
Actinobacillus minor
NCBI taxonomy Id: 591023
Other names: A. minor 202, Actinobacillus minor 202, Actinobacillus minor str. 202, Actinobacillus minor strain 202
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.