STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEV24792.1COG0793 Periplasmic protease. (671 aa)    
Predicted Functional Partners:
EEV24423.1
COG4785 Lipoprotein NlpI, contains TPR repeats.
  
 
 
 0.845
EEV24562.1
Colicin import membrane protein.
   
  0.775
EEV25241.1
Hypothetical protein.
   
  0.775
EEV25339.1
Hypothetical protein.
   
  0.775
EEV24557.1
Hypothetical protein.
   
  0.775
thrA
Bifunctional aspartokinase/homoserine dehydrogenase.
 
  
  0.751
EEV24601.1
Phosphate acetyltransferase; COG0857 BioD-like N-terminal domain of phosphotransacetylase.
   
  0.730
pepN
COG0308 Aminopeptidase N.
    
 0.614
rimK
Ribosomal protein S6 modification protein.
  
 
  0.614
EEV24791.1
COG2989 Uncharacterized protein conserved in bacteria.
 
     0.612
Your Current Organism:
Actinobacillus minor
NCBI taxonomy Id: 591023
Other names: A. minor 202, Actinobacillus minor 202, Actinobacillus minor str. 202, Actinobacillus minor strain 202
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.