Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
EEV24813.1 | EEV24815.1 | AM202_01275 | AM202_01285 | Hypothetical protein; COG0471 Di- and tricarboxylate transporters. | Hypothetical protein. | 0.625 |
EEV24813.1 | EEV24817.1 | AM202_01275 | AM202_01295 | Hypothetical protein; COG0471 Di- and tricarboxylate transporters. | Biotin synthesis protein; COG0500 SAM-dependent methyltransferases. | 0.576 |
EEV24813.1 | EEV24818.1 | AM202_01275 | AM202_01300 | Hypothetical protein; COG0471 Di- and tricarboxylate transporters. | Dithiobiotin synthetase; COG2830 Uncharacterized protein conserved in bacteria. | 0.576 |
EEV24813.1 | EEV24819.1 | AM202_01275 | AM202_01305 | Hypothetical protein; COG0471 Di- and tricarboxylate transporters. | 8-amino-7-oxononanoate synthase; COG0156 7-keto-8-aminopelargonate synthetase and related enzymes. | 0.565 |
EEV24813.1 | EEV24820.1 | AM202_01275 | AM202_01310 | Hypothetical protein; COG0471 Di- and tricarboxylate transporters. | Adenosylmethionine--8-amino-7-oxononanoate transaminase; COG0161 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase. | 0.565 |
EEV24813.1 | bioD | AM202_01275 | AM202_01290 | Hypothetical protein; COG0471 Di- and tricarboxylate transporters. | COG0132 Dethiobiotin synthetase. | 0.576 |
EEV24813.1 | glyS | AM202_01275 | AM202_01315 | Hypothetical protein; COG0471 Di- and tricarboxylate transporters. | COG0751 Glycyl-tRNA synthetase, beta subunit. | 0.458 |
EEV24813.1 | xerC | AM202_01275 | AM202_01280 | Hypothetical protein; COG0471 Di- and tricarboxylate transporters. | COG4973 Site-specific recombinase XerC. | 0.625 |
EEV24815.1 | EEV24813.1 | AM202_01285 | AM202_01275 | Hypothetical protein. | Hypothetical protein; COG0471 Di- and tricarboxylate transporters. | 0.625 |
EEV24815.1 | EEV24817.1 | AM202_01285 | AM202_01295 | Hypothetical protein. | Biotin synthesis protein; COG0500 SAM-dependent methyltransferases. | 0.709 |
EEV24815.1 | EEV24818.1 | AM202_01285 | AM202_01300 | Hypothetical protein. | Dithiobiotin synthetase; COG2830 Uncharacterized protein conserved in bacteria. | 0.709 |
EEV24815.1 | EEV24819.1 | AM202_01285 | AM202_01305 | Hypothetical protein. | 8-amino-7-oxononanoate synthase; COG0156 7-keto-8-aminopelargonate synthetase and related enzymes. | 0.695 |
EEV24815.1 | EEV24820.1 | AM202_01285 | AM202_01310 | Hypothetical protein. | Adenosylmethionine--8-amino-7-oxononanoate transaminase; COG0161 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase. | 0.695 |
EEV24815.1 | EEV24822.1 | AM202_01285 | AM202_01320 | Hypothetical protein. | OsmC family protein; COG1764 Predicted redox protein, regulator of disulfide bond formation. | 0.464 |
EEV24815.1 | bioD | AM202_01285 | AM202_01290 | Hypothetical protein. | COG0132 Dethiobiotin synthetase. | 0.709 |
EEV24815.1 | glyS | AM202_01285 | AM202_01315 | Hypothetical protein. | COG0751 Glycyl-tRNA synthetase, beta subunit. | 0.556 |
EEV24815.1 | xerC | AM202_01285 | AM202_01280 | Hypothetical protein. | COG4973 Site-specific recombinase XerC. | 0.773 |
EEV24817.1 | EEV24813.1 | AM202_01295 | AM202_01275 | Biotin synthesis protein; COG0500 SAM-dependent methyltransferases. | Hypothetical protein; COG0471 Di- and tricarboxylate transporters. | 0.576 |
EEV24817.1 | EEV24815.1 | AM202_01295 | AM202_01285 | Biotin synthesis protein; COG0500 SAM-dependent methyltransferases. | Hypothetical protein. | 0.709 |
EEV24817.1 | EEV24818.1 | AM202_01295 | AM202_01300 | Biotin synthesis protein; COG0500 SAM-dependent methyltransferases. | Dithiobiotin synthetase; COG2830 Uncharacterized protein conserved in bacteria. | 0.990 |
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