STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
bioDCOG0132 Dethiobiotin synthetase. (214 aa)    
Predicted Functional Partners:
EEV24820.1
Adenosylmethionine--8-amino-7-oxononanoate transaminase; COG0161 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase.
 
 0.996
EEV24819.1
8-amino-7-oxononanoate synthase; COG0156 7-keto-8-aminopelargonate synthetase and related enzymes.
 
 
 0.982
bioB
Biotin synthase.
 
 
 0.965
EEV24817.1
Biotin synthesis protein; COG0500 SAM-dependent methyltransferases.
 
  
  0.957
EEV24818.1
Dithiobiotin synthetase; COG2830 Uncharacterized protein conserved in bacteria.
 
    0.945
AM202_0591
Putative ubiquinone/menaquinone biosynthesis methyltransferase.
  
 
 0.715
xerC
COG4973 Site-specific recombinase XerC.
       0.709
EEV24815.1
Hypothetical protein.
       0.709
bioD1
Dethiobiotin synthetase 1.
  
  
 
0.671
glyS
COG0751 Glycyl-tRNA synthetase, beta subunit.
       0.603
Your Current Organism:
Actinobacillus minor
NCBI taxonomy Id: 591023
Other names: A. minor 202, Actinobacillus minor 202, Actinobacillus minor str. 202, Actinobacillus minor strain 202
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