STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
glySCOG0751 Glycyl-tRNA synthetase, beta subunit. (689 aa)    
Predicted Functional Partners:
glyQ
COG0752 Glycyl-tRNA synthetase, alpha subunit.
 0.999
ileS
COG0060 Isoleucyl-tRNA synthetase.
 
  
 0.724
valS
valyl-tRNA synthetase.
  
  
 0.690
leuS
COG0495 Leucyl-tRNA synthetase.
   
  
 0.688
syp
prolyl-tRNA synthetase; 3' end; 5' end is gene AM202_0433 on contig Contig_138.
  
  
 0.651
EEV24822.1
OsmC family protein; COG1764 Predicted redox protein, regulator of disulfide bond formation.
       0.634
EEV24819.1
8-amino-7-oxononanoate synthase; COG0156 7-keto-8-aminopelargonate synthetase and related enzymes.
       0.615
EEV24820.1
Adenosylmethionine--8-amino-7-oxononanoate transaminase; COG0161 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase.
       0.615
aspS
COG0173 Aspartyl-tRNA synthetase.
  
  
 0.608
bioD
COG0132 Dethiobiotin synthetase.
       0.603
Your Current Organism:
Actinobacillus minor
NCBI taxonomy Id: 591023
Other names: A. minor 202, Actinobacillus minor 202, Actinobacillus minor str. 202, Actinobacillus minor strain 202
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