STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tigTrigger factor; COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor). (431 aa)    
Predicted Functional Partners:
EEV25304.1
COG0049 Ribosomal protein S7.
  
 
 0.980
rpsB
30S ribosomal protein S2.
  
 
 0.973
rplC
50S ribosomal protein L3.
  
 
 0.968
rplM
COG0102 Ribosomal protein L13.
   
   0.965
rpsJ
30S ribosomal protein S10.
  
 
 0.963
rplD
50S ribosomal protein L4.
  
 
 0.963
rplB
50S ribosomal protein L2.
  
   0.963
rpsK
30S ribosomal protein S11.
  
 
 0.960
rplW
50S ribosomal protein L23.
  
 
 0.956
rpsU
30S ribosomal protein S21.
  
 
 0.951
Your Current Organism:
Actinobacillus minor
NCBI taxonomy Id: 591023
Other names: A. minor 202, Actinobacillus minor 202, Actinobacillus minor str. 202, Actinobacillus minor strain 202
Server load: low (32%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.