STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEV24888.1Ferrochelatase; COG0276 Protoheme ferro-lyase (ferrochelatase). (319 aa)    
Predicted Functional Partners:
hemE
COG0407 Uroporphyrinogen-III decarboxylase.
 
  
 0.898
cyaY
COG1965 Protein implicated in iron transport, frataxin homolog.
    
 0.854
EEV25389.1
COG4635 Flavodoxin.
    
 0.704
EEV25030.1
HemY-like protein; COG3071 Uncharacterized enzyme of heme biosynthesis.
     
 0.659
EEV24526.1
HemK-like protein/protein-glutamine N-methyl transferase; COG2890 Methylase of polypeptide chain release factors.
     
 0.591
EEV25197.1
N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase; COG2890 Methylase of polypeptide chain release factors.
    
 0.538
EEV25027.1
COG0181 Porphobilinogen deaminase.
 
  
 0.511
EEV24935.1
Copper-containing nitrite reductase precursor; COG2132 Putative multicopper oxidases.
   
 
 0.503
EEV25145.1
COG0635 Coproporphyrinogen III oxidase and related Fe-S oxidoreductases.
 
  
 0.474
EEV24999.1
COG1648 Siroheme synthase (precorrin-2 oxidase/ferrochelatase domain).
     
 0.470
Your Current Organism:
Actinobacillus minor
NCBI taxonomy Id: 591023
Other names: A. minor 202, Actinobacillus minor 202, Actinobacillus minor str. 202, Actinobacillus minor strain 202
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