STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rpmGCOG0267 Ribosomal protein L33. (56 aa)    
Predicted Functional Partners:
rpmB
COG0227 Ribosomal protein L28.
 
 
 0.999
rpsR
COG0238 Ribosomal protein S18.
 
 
 0.990
rplL
50S ribosomal protein L7/L12.
  
 
 0.989
rpmA
COG0211 Ribosomal protein L27.
   
 
 0.988
rplU
COG0261 Ribosomal protein L21.
   
 
 0.988
rplJ
50S ribosomal protein L10.
  
 
 0.988
rplW
50S ribosomal protein L23.
  
 
 0.988
rpsS
30S ribosomal protein S19.
  
 
 0.988
rpsI
COG0103 Ribosomal protein S9.
  
 
 0.988
rplM
COG0102 Ribosomal protein L13.
  
 
 0.988
Your Current Organism:
Actinobacillus minor
NCBI taxonomy Id: 591023
Other names: A. minor 202, Actinobacillus minor 202, Actinobacillus minor str. 202, Actinobacillus minor strain 202
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.