STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AM202_0176Hypothetical protein. (72 aa)    
Predicted Functional Partners:
slmA
HTH-type protein slmA.
 
     0.867
dfp
Coenzyme A biosynthesis bifunctional protein coaBC.
       0.793
dut
Deoxyuridine 5'-triphosphate nucleotidohydrolase (dUTPase).
       0.793
EEV25355.1
COG3092 Uncharacterized protein conserved in bacteria.
  
     0.633
crp
Catabolite gene activator (cAMP receptor protein) (cAMP-regulatory protein).
       0.625
EEV25143.1
COG3078 Uncharacterized protein conserved in bacteria.
  
     0.604
seqA
DNA replication inhibitor protein.
  
     0.593
EEV24456.1
COG3079 Uncharacterized protein conserved in bacteria.
  
     0.578
rseA
Putative sigma-E factor negative regulatory protein.
  
     0.555
radC
DNA repair protein RadC-like protein.
       0.535
Your Current Organism:
Actinobacillus minor
NCBI taxonomy Id: 591023
Other names: A. minor 202, Actinobacillus minor 202, Actinobacillus minor str. 202, Actinobacillus minor strain 202
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.