STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AM202_0186Hemin transport system permease protein. (330 aa)    
Predicted Functional Partners:
AM202_0185
Hemin-binding periplasmic protein.
 
 0.994
AM202_0187
Hemin import ATP-binding protein; 3' end; 5' end is gene AM202_0187 on contig Contig_14.
 
 0.981
fhuC
Ferrichrome ABC transporter ATP-binding protein.
 
 0.981
EEV24667.1
Hemin import ATP-binding protein HmuV; COG1120 ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components.
 
 0.970
EEV25329.1
ABC transporter-related protein; COG1120 ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components.
  
 0.908
fhuD
ABC-type Fe3+-hydroxamate transport system, periplasmic component; FhuD.
 
 0.880
EEV25330.1
Ferrichrome-binding periplasmic protein; COG0614 ABC-type Fe3+-hydroxamate transport system, periplasmic component.
 
 0.879
EEV24669.1
Hypothetical protein; COG0614 ABC-type Fe3+-hydroxamate transport system, periplasmic component.
  
 0.872
AM202_0093
iron(III) ABC transporter, ATP-binding protein.
  
 
  0.815
ACI28438.1
ABC-type multidrug transport system ATPase component.
    
  0.751
Your Current Organism:
Actinobacillus minor
NCBI taxonomy Id: 591023
Other names: A. minor 202, Actinobacillus minor 202, Actinobacillus minor str. 202, Actinobacillus minor strain 202
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