cof protein (Actinobacillus minor) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

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Gene Fusion

Cooccurrence

Coexpression

Experiments

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Textmining

[Homology]

Score

cof

HAD superfamily hydrolase. (261 aa)

Predicted Functional Partners:

mgsA

0.753

ribD

0.738

AM202_0198

0.696

AM202_0201

0.682

EEV25284.1

0.682

EEV24972.1

0.672

ribBA

0.664

AM202_0300

0.534

glpT

0.513

manA

0.513

Your Current Organism:

Actinobacillus minor

NCBI taxonomy Id: 591023
Other names: A. minor 202, Actinobacillus minor 202, Actinobacillus minor str. 202, Actinobacillus minor strain 202

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AM202_0198	AM202_0201	AM202_0198	AM202_0201	Hypothetical protein.	PTS system mannose-specific EIIAB component; 3' end; 5' end is gene AM202_0201 on contig Contig_10.	0.682
AM202_0198	EEV24972.1	AM202_0198	AM202_02070	Hypothetical protein.	Hypothetical protein; COG0277 FAD/FMN-containing dehydrogenases.	0.672
AM202_0198	EEV25284.1	AM202_0198	AM202_03650	Hypothetical protein.	PTS system mannose/fructose/sorbose family IIB subunit; COG2893 Phosphotransferase system, mannose/fructose-specific component IIA.	0.682
AM202_0198	cof	AM202_0198	AM202_0196	Hypothetical protein.	HAD superfamily hydrolase.	0.696
AM202_0198	manA	AM202_0198	AM202_0235	Hypothetical protein.	Mannose-6-phosphate isomerase.	0.448
AM202_0198	ribBA	AM202_0198	AM202_0502	Hypothetical protein.	Riboflavin biosynthesis protein.	0.664
AM202_0198	ribD	AM202_0198	AM202_0500	Hypothetical protein.	Riboflavin biosynthesis protein.	0.738
AM202_0201	AM202_0198	AM202_0201	AM202_0198	PTS system mannose-specific EIIAB component; 3' end; 5' end is gene AM202_0201 on contig Contig_10.	Hypothetical protein.	0.682
AM202_0201	EEV25284.1	AM202_0201	AM202_03650	PTS system mannose-specific EIIAB component; 3' end; 5' end is gene AM202_0201 on contig Contig_10.	PTS system mannose/fructose/sorbose family IIB subunit; COG2893 Phosphotransferase system, mannose/fructose-specific component IIA.	0.983
AM202_0201	cof	AM202_0201	AM202_0196	PTS system mannose-specific EIIAB component; 3' end; 5' end is gene AM202_0201 on contig Contig_10.	HAD superfamily hydrolase.	0.682
AM202_0201	manA	AM202_0201	AM202_0235	PTS system mannose-specific EIIAB component; 3' end; 5' end is gene AM202_0201 on contig Contig_10.	Mannose-6-phosphate isomerase.	0.788
AM202_0201	ribBA	AM202_0201	AM202_0502	PTS system mannose-specific EIIAB component; 3' end; 5' end is gene AM202_0201 on contig Contig_10.	Riboflavin biosynthesis protein.	0.443
AM202_0201	ribD	AM202_0201	AM202_0500	PTS system mannose-specific EIIAB component; 3' end; 5' end is gene AM202_0201 on contig Contig_10.	Riboflavin biosynthesis protein.	0.424
AM202_0300	cof	AM202_0300	AM202_0196	Hypothetical protein.	HAD superfamily hydrolase.	0.534
AM202_0300	ribD	AM202_0300	AM202_0500	Hypothetical protein.	Riboflavin biosynthesis protein.	0.744
EEV24972.1	AM202_0198	AM202_02070	AM202_0198	Hypothetical protein; COG0277 FAD/FMN-containing dehydrogenases.	Hypothetical protein.	0.672
EEV24972.1	cof	AM202_02070	AM202_0196	Hypothetical protein; COG0277 FAD/FMN-containing dehydrogenases.	HAD superfamily hydrolase.	0.672
EEV25284.1	AM202_0198	AM202_03650	AM202_0198	PTS system mannose/fructose/sorbose family IIB subunit; COG2893 Phosphotransferase system, mannose/fructose-specific component IIA.	Hypothetical protein.	0.682
EEV25284.1	AM202_0201	AM202_03650	AM202_0201	PTS system mannose/fructose/sorbose family IIB subunit; COG2893 Phosphotransferase system, mannose/fructose-specific component IIA.	PTS system mannose-specific EIIAB component; 3' end; 5' end is gene AM202_0201 on contig Contig_10.	0.983
EEV25284.1	cof	AM202_03650	AM202_0196	PTS system mannose/fructose/sorbose family IIB subunit; COG2893 Phosphotransferase system, mannose/fructose-specific component IIA.	HAD superfamily hydrolase.	0.682