STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEV24951.1COG4977 Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain. (338 aa)    
Predicted Functional Partners:
rpoA
DNA-directed RNA polymerase subunit alpha.
    
   0.732
EEV24950.1
Hypothetical protein; COG2220 Predicted Zn-dependent hydrolases of the beta-lactamase fold.
 
     0.699
EEV25110.1
COG0281 Malic enzyme.
   
 
 0.675
AM202_0557
Putative flavoprotein.
 
      0.554
EEV25160.1
Putative secreted protein; COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily).
  
     0.493
EEV24278.1
COG0568 DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32).
    
 
 0.448
rpoB
DNA-directed RNA polymerase subunit beta.
    
   0.424
EEV24822.1
OsmC family protein; COG1764 Predicted redox protein, regulator of disulfide bond formation.
  
     0.422
EEV24903.1
COG0076 Glutamate decarboxylase and related PLP-dependent proteins.
  
    0.417
EEV25194.1
Aerobic respiration control sensor protein; COG0642 Signal transduction histidine kinase.
     
 0.408
Your Current Organism:
Actinobacillus minor
NCBI taxonomy Id: 591023
Other names: A. minor 202, Actinobacillus minor 202, Actinobacillus minor str. 202, Actinobacillus minor strain 202
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.