Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AM202_0213 | AM202_0214 | AM202_0213 | AM202_0214 | Hypothetical protein. | Lipoprotein. | 0.730 |
AM202_0213 | AM202_0215 | AM202_0213 | AM202_0215 | Hypothetical protein. | Hypothetical protein. | 0.703 |
AM202_0213 | AM202_0216 | AM202_0213 | AM202_0216 | Hypothetical protein. | Outer membrane antigenic lipoprotein B precursor. | 0.693 |
AM202_0213 | surE | AM202_0213 | AM202_0212 | Hypothetical protein. | 5'-nucleotidase surE. | 0.759 |
AM202_0213 | truD | AM202_0213 | AM202_0211 | Hypothetical protein. | tRNA pseudouridine synthase D. | 0.790 |
AM202_0214 | AM202_0213 | AM202_0214 | AM202_0213 | Lipoprotein. | Hypothetical protein. | 0.730 |
AM202_0214 | AM202_0215 | AM202_0214 | AM202_0215 | Lipoprotein. | Hypothetical protein. | 0.757 |
AM202_0214 | AM202_0216 | AM202_0214 | AM202_0216 | Lipoprotein. | Outer membrane antigenic lipoprotein B precursor. | 0.721 |
AM202_0214 | surE | AM202_0214 | AM202_0212 | Lipoprotein. | 5'-nucleotidase surE. | 0.702 |
AM202_0214 | truD | AM202_0214 | AM202_0211 | Lipoprotein. | tRNA pseudouridine synthase D. | 0.697 |
AM202_0215 | AM202_0213 | AM202_0215 | AM202_0213 | Hypothetical protein. | Hypothetical protein. | 0.703 |
AM202_0215 | AM202_0214 | AM202_0215 | AM202_0214 | Hypothetical protein. | Lipoprotein. | 0.757 |
AM202_0215 | AM202_0216 | AM202_0215 | AM202_0216 | Hypothetical protein. | Outer membrane antigenic lipoprotein B precursor. | 0.737 |
AM202_0215 | surE | AM202_0215 | AM202_0212 | Hypothetical protein. | 5'-nucleotidase surE. | 0.670 |
AM202_0215 | truD | AM202_0215 | AM202_0211 | Hypothetical protein. | tRNA pseudouridine synthase D. | 0.670 |
AM202_0216 | AM202_0213 | AM202_0216 | AM202_0213 | Outer membrane antigenic lipoprotein B precursor. | Hypothetical protein. | 0.693 |
AM202_0216 | AM202_0214 | AM202_0216 | AM202_0214 | Outer membrane antigenic lipoprotein B precursor. | Lipoprotein. | 0.721 |
AM202_0216 | AM202_0215 | AM202_0216 | AM202_0215 | Outer membrane antigenic lipoprotein B precursor. | Hypothetical protein. | 0.737 |
AM202_0216 | surE | AM202_0216 | AM202_0212 | Outer membrane antigenic lipoprotein B precursor. | 5'-nucleotidase surE. | 0.709 |
AM202_0216 | truD | AM202_0216 | AM202_0211 | Outer membrane antigenic lipoprotein B precursor. | tRNA pseudouridine synthase D. | 0.654 |
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