STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEV25008.1COG1538 Outer membrane protein. (461 aa)    
Predicted Functional Partners:
AM202_0040
Putative macrolide-specific ABC-type efflux carrier.
 
 0.999
EEV24464.1
COG0845 Membrane-fusion protein.
 
 0.955
apxIID
ApxIID.
 
 0.947
acrA2
Membrane-fusion protein.
 
 0.946
EEV25180.1
AcrA protein; COG0845 Membrane-fusion protein.
 
 0.936
EEV24400.1
Acriflavine resistance protein; COG0841 Cation/multidrug efflux pump.
 0.922
EEV24401.1
COG0845 Membrane-fusion protein.
 
 0.905
EEV25179.1
AcrA protein; COG0845 Membrane-fusion protein.
 
 0.904
lolD
Lipoprotein-releasing system ATP-binding protein lolD.
  
 0.836
EEV24581.1
Plp4; COG2913 Small protein A (tmRNA-binding).
  
  0.780
Your Current Organism:
Actinobacillus minor
NCBI taxonomy Id: 591023
Other names: A. minor 202, Actinobacillus minor 202, Actinobacillus minor str. 202, Actinobacillus minor strain 202
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