STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AM202_0233Hypothetical protein. (249 aa)    
Predicted Functional Partners:
AM202_0232
Putative D-alanyl-D-alanine carboxypeptidase; 3' end; 5' end is gene AM202_0232 on contig Contig_10.
       0.551
EEV24890.1
COG0594 RNase P protein component.
  
    0.512
AM202_0234
Hypothetical protein.
  
    0.484
EEV24891.1
Hypothetical protein.
  
    0.470
lolB
COG3017 Outer membrane lipoprotein involved in outer membrane biogenesis.
  
     0.460
AM202_0478
Hypothetical protein.
  
     0.456
coaD
Phosphopantetheine adenylyltransferase.
  
  
 0.448
Your Current Organism:
Actinobacillus minor
NCBI taxonomy Id: 591023
Other names: A. minor 202, Actinobacillus minor 202, Actinobacillus minor str. 202, Actinobacillus minor strain 202
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.