STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
menDMenaquinone biosynthesis protein menD. (568 aa)    
Predicted Functional Partners:
AM202_0245
Putative acyl-CoA thioester hydrolase.
 
 
 0.982
menF
Menaquinone-specific isochorismate synthase.
 
 0.977
EEV25046.1
COG1441 O-succinylbenzoate synthase.
 
  
 0.924
EEV24986.1
Naphthoate synthase; COG0447 Dihydroxynaphthoic acid synthase.
 
 
 0.878
menE
2-succinylbenzoate-CoA ligase.
 
 
 0.860
menA
1,4-dihydroxy-2-naphthoate octaprenyltransferase.
 
   
 0.827
AM202_0117
Putative esterase/lipase.
  
 
 0.682
AM202_0300
Hypothetical protein.
 
   
 0.643
EEV25160.1
Putative secreted protein; COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily).
  
 
 0.523
EEV24361.1
Hypothetical protein; COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily).
  
 
 0.523
Your Current Organism:
Actinobacillus minor
NCBI taxonomy Id: 591023
Other names: A. minor 202, Actinobacillus minor 202, Actinobacillus minor str. 202, Actinobacillus minor strain 202
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.