STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEV25047.1Ribosomal small subunit pseudouridine synthase A; COG1187 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases. (230 aa)    
Predicted Functional Partners:
EEV25048.1
Bicyclomycin/multidrug efflux system; COG0477 Permeases of the major facilitator superfamily.
       0.792
rlmL
Putative N6-adenine-specific DNA methylase.
  
 
 0.658
engA
GTP-binding protein EngA; COG1160 Predicted GTPases.
 
  
 0.619
uvrC
COG0322 Nuclease subunit of the excinuclease complex.
 
    0.616
EEV25320.1
COG0708 Exonuclease III.
  
    0.610
EEV25046.1
COG1441 O-succinylbenzoate synthase.
       0.568
EEV25128.1
COG0564 Pseudouridylate synthases, 23S RNA-specific.
  
 
 0.556
EEV24391.1
COG0283 Cytidylate kinase.
  
  
 0.533
EEV25049.1
COG0188 Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit.
 
    0.521
rluD
23S rRNA pseudouridine synthase D.
  
 
 0.452
Your Current Organism:
Actinobacillus minor
NCBI taxonomy Id: 591023
Other names: A. minor 202, Actinobacillus minor 202, Actinobacillus minor str. 202, Actinobacillus minor strain 202
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.