STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEV25052.1COG0488 ATPase components of ABC transporters with duplicated ATPase domains. (642 aa)    
Predicted Functional Partners:
rplE
50S ribosomal protein L5.
   
  0.941
rplA
50S ribosomal protein L1.
   
  0.940
rpsN
30S ribosomal protein S14.
   
  0.940
rpsL
COG0048 Ribosomal protein S12.
   
  0.939
rplB
50S ribosomal protein L2.
   
  0.939
rplU
COG0261 Ribosomal protein L21.
   
   0.813
rplD
50S ribosomal protein L4.
   
 
 0.813
rpsO
30S ribosomal protein S15.
   
   0.811
rpsC
30S ribosomal protein S3.
   
   0.810
rplC
50S ribosomal protein L3.
   
 
 0.807
Your Current Organism:
Actinobacillus minor
NCBI taxonomy Id: 591023
Other names: A. minor 202, Actinobacillus minor 202, Actinobacillus minor str. 202, Actinobacillus minor strain 202
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