STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEV25053.1COG0743 1-deoxy-D-xylulose 5-phosphate reductoisomerase. (395 aa)    
Predicted Functional Partners:
ispD
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; COG1211 4-diphosphocytidyl-2-methyl-D-erithritol synthase.
 
  
 0.936
ispF
COG0245 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase.
 
  
 0.936
EEV24490.1
COG1154 Deoxyxylulose-5-phosphate synthase.
 
 
 0.922
EEV24684.1
COG0020 Undecaprenyl pyrophosphate synthase.
  
  
 0.861
ipk
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; COG1947 4-diphosphocytidyl-2C-methyl-D-erythritol 2-phosphate synthase.
 
  
 0.838
ispH
4-hydroxy-3-methylbut-2-enyl diphosphate reductase; COG0761 Penicillin tolerance protein.
 
   
 0.822
ispG
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase.
 
   
 0.822
EEV24683.1
Phosphatidate cytidylyltransferase; COG0575 CDP-diglyceride synthetase.
  
  
 0.668
EEV24870.1
COG0021 Transketolase.
    
 0.644
fabG
3-ketoacyl-(acyl-carrier-protein) reductase; COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases).
    
  0.625
Your Current Organism:
Actinobacillus minor
NCBI taxonomy Id: 591023
Other names: A. minor 202, Actinobacillus minor 202, Actinobacillus minor str. 202, Actinobacillus minor strain 202
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.