STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEV25057.1COG0290 Translation initiation factor 3 (IF-3). (112 aa)    
Predicted Functional Partners:
rpsK
30S ribosomal protein S11.
   
 
 0.977
EEV25304.1
COG0049 Ribosomal protein S7.
   
 
 0.976
rpsM
30S ribosomal protein S13.
   
 
 0.975
rplT
COG0292 Ribosomal protein L20.
 
  
 0.971
rpsS
30S ribosomal protein S19.
   
 
 0.971
rpsR
COG0238 Ribosomal protein S18.
  
 
 0.962
infA
COG0361 Translation initiation factor 1 (IF-1).
  
 
 0.959
rpsB
30S ribosomal protein S2.
 
 
 0.955
rpsC
30S ribosomal protein S3.
  
 
 0.954
rpsH
30S ribosomal protein S8.
  
 
 0.951
Your Current Organism:
Actinobacillus minor
NCBI taxonomy Id: 591023
Other names: A. minor 202, Actinobacillus minor 202, Actinobacillus minor str. 202, Actinobacillus minor strain 202
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