STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hslOHeat shock-like protein 33. (296 aa)    
Predicted Functional Partners:
hslR
Heat shock-like protein 15.
  
  
 0.881
hslU
COG1220 ATP-dependent protease HslVU (ClpYQ), ATPase subunit.
   
  
 0.625
EEV24474.1
COG5405 ATP-dependent protease HslVU (ClpYQ), peptidase subunit.
  
  
 0.590
AM202_0268
Hypothetical protein.
       0.542
dnaJ
Chaperone protein dnaJ.
  
  
 0.529
grpE
Heat shock protein (HSP-70 cofactor).
   
  
 0.492
nudE
ADP-ribose diphosphatase NudE.
  
    0.470
EEV24771.1
COG0225 Peptide methionine sulfoxide reductase.
     
 0.462
lon
ATP-dependent protease La.
  
  
 0.461
arsC-2
ArsC protein.
 
   
 0.444
Your Current Organism:
Actinobacillus minor
NCBI taxonomy Id: 591023
Other names: A. minor 202, Actinobacillus minor 202, Actinobacillus minor str. 202, Actinobacillus minor strain 202
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.