STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
nudEADP-ribose diphosphatase NudE. (182 aa)    
Predicted Functional Partners:
EEV25411.1
Nicotinamide-nucleotide adenylyltransferase; COG1396 Predicted transcriptional regulators.
  
 
 0.768
metH
COG0646 Methionine synthase I (cobalamin-dependent), methyltransferase domain.
    
  0.675
metH-2
COG1410 Methionine synthase I, cobalamin-binding domain.
    
  0.675
cysQ
cysQ-like protein.
  
    0.623
hslR
Heat shock-like protein 15.
       0.609
surE
5'-nucleotidase surE.
  
  
  0.592
AM202_0268
Hypothetical protein.
       0.572
EEV25154.1
Ribose-phosphate pyrophosphokinase; COG0462 Phosphoribosylpyrophosphate synthetase.
    
  0.554
folE
COG0302 GTP cyclohydrolase I.
  
 
 0.477
zwf
Glucose-6-phosphate 1-dehydrogenase.
    
  0.475
Your Current Organism:
Actinobacillus minor
NCBI taxonomy Id: 591023
Other names: A. minor 202, Actinobacillus minor 202, Actinobacillus minor str. 202, Actinobacillus minor strain 202
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