STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AM202_0278Putative transporter. (426 aa)    
Predicted Functional Partners:
AM202_0279
Hypothetical protein.
       0.651
EEV24247.1
Putative outer membrane protein.
  
     0.651
AM202_0694
Hypothetical protein.
  
     0.623
dnaJ
Chaperone protein dnaJ.
   
 
 0.532
AM202_0280
Hypothetical protein.
 
     0.499
EEV24903.1
COG0076 Glutamate decarboxylase and related PLP-dependent proteins.
     
 0.476
EEV24469.1
Hypothetical protein.
 
    0.465
dnaK
Chaperone protein dnaK.
    
  0.440
hscA
Chaperone protein HscA; COG0443 Molecular chaperone.
    
  0.440
hscA-2
Chaperone protein HscA; COG0443 Molecular chaperone.
    
  0.440
Your Current Organism:
Actinobacillus minor
NCBI taxonomy Id: 591023
Other names: A. minor 202, Actinobacillus minor 202, Actinobacillus minor str. 202, Actinobacillus minor strain 202
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.