STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
recCExodeoxyribonuclease V gamma chain. (1085 aa)    
Predicted Functional Partners:
EEV25059.1
COG1074 ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains).
 
 0.996
recD
Exodeoxyribonuclease V, alpha subunit.
 
 0.994
EEV24585.1
TraA; conjugal transfer protein TraA.
  
 0.940
ptrA
Protease 3 precursor.
     
 0.804
AM202_0288
Hypothetical protein.
       0.633
AM202_0289
Hypothetical protein.
       0.623
AM202_0286
Hypothetical protein.
       0.615
AM202_0287
Hypothetical protein.
       0.615
fabA
3-hydroxydecanoyl-(acyl carrier protein) dehydratase.
 
     0.512
Your Current Organism:
Actinobacillus minor
NCBI taxonomy Id: 591023
Other names: A. minor 202, Actinobacillus minor 202, Actinobacillus minor str. 202, Actinobacillus minor strain 202
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.