STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEV25131.1Recombination protein 2; COG0658 Predicted membrane metal-binding protein. (721 aa)    
Predicted Functional Partners:
EEV24857.1
Competence protein F; COG1040 Predicted amidophosphoribosyltransferases.
 
  
 0.888
smf
Protein smf (DNA-processing chain A).
 
  
 0.866
EEV25040.1
COG2812 DNA polymerase III, gamma/tau subunits.
 
  
  0.809
EEV24207.1
Pili/fimbriae biogenesis protein; COG1459 Type II secretory pathway, component PulF.
  
  
 0.768
EEV24208.1
Fimbrial leader peptidase; COG1989 Type II secretory pathway, prepilin signal peptidase PulO and related peptidases.
  
  
 0.704
ribBA
Riboflavin biosynthesis protein.
     
 0.685
ribD
Riboflavin biosynthesis protein.
     
 0.677
birA
Bifunctional biotin operon repressor/biotin synthetase BirA.
     
 0.670
EEV24206.1
COG2804 Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB.
 
  
 0.662
AM202_0289
Hypothetical protein.
  
  
 0.653
Your Current Organism:
Actinobacillus minor
NCBI taxonomy Id: 591023
Other names: A. minor 202, Actinobacillus minor 202, Actinobacillus minor str. 202, Actinobacillus minor strain 202
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