STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AM202_0304Putative nitroreductase. (187 aa)    
Predicted Functional Partners:
EEV24999.1
COG1648 Siroheme synthase (precorrin-2 oxidase/ferrochelatase domain).
  
 
 0.787
lcfA
long-chain-fatty-acid--CoA ligase.
  
 
   0.649
birA
Bifunctional biotin operon repressor/biotin synthetase BirA.
  
    0.595
ilvD
Dihydroxy-acid dehydratase.
       0.565
menE
2-succinylbenzoate-CoA ligase.
    
   0.557
ACI28438.1
ABC-type multidrug transport system ATPase component.
  
  
 0.521
AM202_0660
Hypothetical protein.
  
  
 0.485
ribBA
Riboflavin biosynthesis protein.
   
 
 0.484
EEV24834.1
COG0431 Predicted flavoprotein.
     
 0.471
AM202_0001
Putative NAD-dependent epimerase/dehydratase.
   
 
  0.463
Your Current Organism:
Actinobacillus minor
NCBI taxonomy Id: 591023
Other names: A. minor 202, Actinobacillus minor 202, Actinobacillus minor str. 202, Actinobacillus minor strain 202
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