STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AM202_0310Tetratricopeptide repeat (TPR) family protein. (396 aa)    
Predicted Functional Partners:
alaS
COG0013 Alanyl-tRNA synthetase.
   
 0.937
lsgF
Putative glycosyl transferase.
  
 0.898
EEV24787.1
COG2183 Transcriptional accessory protein.
    
 0.896
dnaJ
Chaperone protein dnaJ.
    
 0.886
EEV24806.1
Hypothetical protein; COG5655 Plasmid rolling circle replication initiator protein and truncated derivatives.
   
 0.875
EEV24807.1
COG5655 Plasmid rolling circle replication initiator protein and truncated derivatives.
   
 0.875
EEV24277.1
Hypothetical protein.
   
 0.875
dnaK
Chaperone protein dnaK.
   
 0.871
hscA
Chaperone protein HscA; COG0443 Molecular chaperone.
   
 0.871
hscA-2
Chaperone protein HscA; COG0443 Molecular chaperone.
   
 0.871
Your Current Organism:
Actinobacillus minor
NCBI taxonomy Id: 591023
Other names: A. minor 202, Actinobacillus minor 202, Actinobacillus minor str. 202, Actinobacillus minor strain 202
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.