STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
nrfGFormate-dependent nitrite reductase complex NrfG. (248 aa)    
Predicted Functional Partners:
AM202_0313
Putative cytochrome c.
  
 0.983
dsbE
Putative disulfide bound formation protein E.
 
  
 0.897
EEV24550.1
Cytochrome c-type biogenesis protein CcmF; COG1138 Cytochrome c biogenesis factor.
 
 
 0.895
nrfE
Cytochrome c-type biogenesis protein NrfE; 3' end; 5' end is gene AM202_0315 on contig Contig_26.
 
 
 0.889
EEV24543.1
Cytochrome c nitrite reductase pentaheme subunit.
 
  
 0.789
EEV24541.1
Nitrate reductase, transmembrane protein; COG3301 Formate-dependent nitrite reductase, membrane component.
 
  
 0.770
ribBA
Riboflavin biosynthesis protein.
    
  0.673
AM202_0219
Putative napD protein.
 
     0.664
EEV24551.1
COG2332 Cytochrome c-type biogenesis protein CcmE.
 
  
 0.638
EEV24450.1
COG3088 Uncharacterized protein involved in biosynthesis of c-type cytochromes.
  
 0.628
Your Current Organism:
Actinobacillus minor
NCBI taxonomy Id: 591023
Other names: A. minor 202, Actinobacillus minor 202, Actinobacillus minor str. 202, Actinobacillus minor strain 202
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.