STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hemACOG0373 Glutamyl-tRNA reductase. (435 aa)    
Predicted Functional Partners:
EEV25027.1
COG0181 Porphobilinogen deaminase.
  
 0.964
EEV24219.1
COG0001 Glutamate-1-semialdehyde aminotransferase.
 
 0.957
EEV24999.1
COG1648 Siroheme synthase (precorrin-2 oxidase/ferrochelatase domain).
 
 
 0.931
EEV24280.1
COG0113 Delta-aminolevulinic acid dehydratase.
 
  
 0.838
gltX
COG0008 Glutamyl- and glutaminyl-tRNA synthetases.
     
 0.707
EEV25028.1
COG1587 Uroporphyrinogen-III synthase.
  
 
 0.659
EEV24329.1
COG0008 Glutamyl- and glutaminyl-tRNA synthetases.
     
 0.655
EEV24778.1
COG4992 Ornithine/acetylornithine aminotransferase.
     
 0.649
glyA
COG0112 Glycine/serine hydroxymethyltransferase.
    
  0.571
thyA
Thymidylate synthase.
     
 0.570
Your Current Organism:
Actinobacillus minor
NCBI taxonomy Id: 591023
Other names: A. minor 202, Actinobacillus minor 202, Actinobacillus minor str. 202, Actinobacillus minor strain 202
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