STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEV25214.1COG0629 Single-stranded DNA-binding protein. (175 aa)    
Predicted Functional Partners:
topA
DNA topoisomerase I.
  
 
 0.955
dnaE
COG0587 DNA polymerase III, alpha subunit.
 
 
 0.952
EEV25040.1
COG2812 DNA polymerase III, gamma/tau subunits.
    
 0.946
EEV24835.1
COG2927 DNA polymerase III, chi subunit.
    
 0.933
priA
Primosomal protein N'.
  
 
 0.900
rpsF
COG0360 Ribosomal protein S6.
  
  
 0.843
rnhA
Ribonuclease HI.
   
 
 0.810
rpsJ
30S ribosomal protein S10.
  
 
 0.774
rpsB
30S ribosomal protein S2.
  
   0.766
EEV25304.1
COG0049 Ribosomal protein S7.
 
   0.742
Your Current Organism:
Actinobacillus minor
NCBI taxonomy Id: 591023
Other names: A. minor 202, Actinobacillus minor 202, Actinobacillus minor str. 202, Actinobacillus minor strain 202
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