STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tyrABifunctional chorismate mutase/prephenate dehydrogenase; COG1605 Chorismate mutase. (372 aa)    
Predicted Functional Partners:
aroA
3-phosphoshikimate 1-carboxyvinyltransferase.
 
 
 0.989
aroC
Chorismate synthase.
  
 0.984
EEV25369.1
P-protein; COG1605 Chorismate mutase.
 0.976
EEV24970.1
COG0079 Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase.
 
 
 0.959
EEV25233.1
Phospho-2-dehydro-3-deoxyheptonate aldolase; COG0722 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase.
  
 
 0.951
EEV25130.1
Bifunctional indole-3-glycerol phosphate synthase/phosphoribosylanthranilate isomerase; COG0134 Indole-3-glycerol phosphate synthase.
 
 
 0.940
EEV24378.1
COG0079 Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase.
  
 
 0.939
aroB
COG0337 3-dehydroquinate synthetase.
 
 
 0.928
aroK
COG0703 Shikimate kinase.
  
 
 0.907
EEV24968.1
Imidazole glycerol-phosphate dehydratase/histidinol phosphatase; COG0241 Histidinol phosphatase and related phosphatases.
 
 
 0.869
Your Current Organism:
Actinobacillus minor
NCBI taxonomy Id: 591023
Other names: A. minor 202, Actinobacillus minor 202, Actinobacillus minor str. 202, Actinobacillus minor strain 202
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