STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rnfEElectron transport complex protein RnfE. (229 aa)    
Predicted Functional Partners:
rnfG
Electron transport complex protein RnfG.
 
 0.998
rnfD
Electron transport complex protein RnfD.
 
 0.998
rnfC
Electron transport complex protein RnfC; 5' end; 3' end is gene AM202_0348 on contig Contig_26.
 
 0.985
rnfB
Electron transport complex protein RnfB.
 
 0.980
rnfA
Electron transport complex protein RnfA.
 
0.964
EEV24200.1
COG0177 Predicted EndoIII-related endonuclease.
 
  
 0.854
msbB
Lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase.
    
  0.779
AM202_0345
Hypothetical protein.
       0.773
AM202_0341
Hypothetical protein.
       0.746
AM202_0343
Putative transport protein, TerC family.
       0.746
Your Current Organism:
Actinobacillus minor
NCBI taxonomy Id: 591023
Other names: A. minor 202, Actinobacillus minor 202, Actinobacillus minor str. 202, Actinobacillus minor strain 202
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.