EEV25244.1 protein (Actinobacillus minor) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

EEV25244.1

Monothiol glutaredoxin-like protein; COG0278 Glutaredoxin-related protein. (108 aa)

Predicted Functional Partners:

bolA

0.991

AM202_0575

0.845

mrp

0.797

AM202_0494

0.729

AM202_0148

0.660

EEV25188.1

0.653

EEV25271.1

0.650

EEV25189.1

0.632

EEV24685.1

0.627

EEV24507.1

0.602

Your Current Organism:

Actinobacillus minor

NCBI taxonomy Id: 591023
Other names: A. minor 202, Actinobacillus minor 202, Actinobacillus minor str. 202, Actinobacillus minor strain 202

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AM202_0148	AM202_0575	AM202_0148	AM202_0575	Iron-sulfur cluster insertion protein erpA.	Putative DNA uptake protein.	0.642
AM202_0148	EEV25189.1	AM202_0148	AM202_03175	Iron-sulfur cluster insertion protein erpA.	Scaffold protein; COG0822 NifU homolog involved in Fe-S cluster formation.	0.699
AM202_0148	EEV25244.1	AM202_0148	AM202_03450	Iron-sulfur cluster insertion protein erpA.	Monothiol glutaredoxin-like protein; COG0278 Glutaredoxin-related protein.	0.660
AM202_0494	EEV25244.1	AM202_0494	AM202_03450	Hypothetical protein.	Monothiol glutaredoxin-like protein; COG0278 Glutaredoxin-related protein.	0.729
AM202_0575	AM202_0148	AM202_0575	AM202_0148	Putative DNA uptake protein.	Iron-sulfur cluster insertion protein erpA.	0.642
AM202_0575	EEV25188.1	AM202_0575	AM202_03170	Putative DNA uptake protein.	hesB family protein.	0.565
AM202_0575	EEV25189.1	AM202_0575	AM202_03175	Putative DNA uptake protein.	Scaffold protein; COG0822 NifU homolog involved in Fe-S cluster formation.	0.958
AM202_0575	EEV25244.1	AM202_0575	AM202_03450	Putative DNA uptake protein.	Monothiol glutaredoxin-like protein; COG0278 Glutaredoxin-related protein.	0.845
AM202_0575	EEV25271.1	AM202_0575	AM202_03585	Putative DNA uptake protein.	Putative peroxiredoxin/glutaredoxin family protein; COG0678 Peroxiredoxin.	0.617
AM202_0575	bolA	AM202_0575	AM202_0732	Putative DNA uptake protein.	Putative transcriptional regulator.	0.594
AM202_0575	mrp	AM202_0575	AM202_0796	Putative DNA uptake protein.	Mrp-like protein, ATP-binding protein.	0.476
EEV24507.1	EEV25244.1	AM202_06108	AM202_03450	COG0515 Serine/threonine protein kinase.	Monothiol glutaredoxin-like protein; COG0278 Glutaredoxin-related protein.	0.602
EEV24685.1	EEV25244.1	AM202_00635	AM202_03450	COG0441 Threonyl-tRNA synthetase.	Monothiol glutaredoxin-like protein; COG0278 Glutaredoxin-related protein.	0.627
EEV25188.1	AM202_0575	AM202_03170	AM202_0575	hesB family protein.	Putative DNA uptake protein.	0.565
EEV25188.1	EEV25189.1	AM202_03170	AM202_03175	hesB family protein.	Scaffold protein; COG0822 NifU homolog involved in Fe-S cluster formation.	0.931
EEV25188.1	EEV25244.1	AM202_03170	AM202_03450	hesB family protein.	Monothiol glutaredoxin-like protein; COG0278 Glutaredoxin-related protein.	0.653
EEV25189.1	AM202_0148	AM202_03175	AM202_0148	Scaffold protein; COG0822 NifU homolog involved in Fe-S cluster formation.	Iron-sulfur cluster insertion protein erpA.	0.699
EEV25189.1	AM202_0575	AM202_03175	AM202_0575	Scaffold protein; COG0822 NifU homolog involved in Fe-S cluster formation.	Putative DNA uptake protein.	0.958
EEV25189.1	EEV25188.1	AM202_03175	AM202_03170	Scaffold protein; COG0822 NifU homolog involved in Fe-S cluster formation.	hesB family protein.	0.931
EEV25189.1	EEV25244.1	AM202_03175	AM202_03450	Scaffold protein; COG0822 NifU homolog involved in Fe-S cluster formation.	Monothiol glutaredoxin-like protein; COG0278 Glutaredoxin-related protein.	0.632