STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
recRCOG0353 Recombinational DNA repair protein (RecF pathway). (201 aa)    
Predicted Functional Partners:
EEV25246.1
COG0718 Uncharacterized protein conserved in bacteria.
 
  
 0.983
recO
COG1381 Recombinational DNA repair protein (RecF pathway).
 
 0.967
recF
Recombination protein F; COG1195 Recombinational DNA repair ATPase (RecF pathway).
 
 
 0.841
dnaA
COG0593 ATPase involved in DNA replication initiation.
  
  
 0.687
EEV25040.1
COG2812 DNA polymerase III, gamma/tau subunits.
 
  
 0.614
uvrC
COG0322 Nuclease subunit of the excinuclease complex.
 
 
 
 0.612
xerD
Site-specific recombinase XerD.
  
   
 0.606
EEV25244.1
Monothiol glutaredoxin-like protein; COG0278 Glutaredoxin-related protein.
       0.597
ftsK
DNA translocase FtsK.
 
     0.572
xerC
COG4973 Site-specific recombinase XerC.
  
   
 0.559
Your Current Organism:
Actinobacillus minor
NCBI taxonomy Id: 591023
Other names: A. minor 202, Actinobacillus minor 202, Actinobacillus minor str. 202, Actinobacillus minor strain 202
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.