STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rplICOG0359 Ribosomal protein L9. (149 aa)    
Predicted Functional Partners:
rpsF
COG0360 Ribosomal protein S6.
 
 
 0.997
rpsR
COG0238 Ribosomal protein S18.
 
 
 0.997
rplD
50S ribosomal protein L4.
   
 0.996
rplO
50S ribosomal protein L15.
   
 0.996
rplL
50S ribosomal protein L7/L12.
   
 0.994
rplU
COG0261 Ribosomal protein L21.
 
 
 0.989
rplP
50S ribosomal protein L16.
   
 0.989
rplR
50S ribosomal protein L18.
  
 
 0.989
rpsD
30S ribosomal protein S4.
  
 
 0.989
rplT
COG0292 Ribosomal protein L20.
  
 
 0.988
Your Current Organism:
Actinobacillus minor
NCBI taxonomy Id: 591023
Other names: A. minor 202, Actinobacillus minor 202, Actinobacillus minor str. 202, Actinobacillus minor strain 202
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.